Matching the jug to the transfers in the case is worth a ton of power, as is porting the stock jug since they all have varying amounts of core shift and mis-matched/blocked ports.
As far as more simple mods, gasket matching the intake and exhaust and cleaning up the burrs in the cylinder is easy. Also clean the cylinder well with hot water and dish soap before running since not all vendors go through the engines before sale and its common to have shavings and metal bits floating around. You'd be surprised and what falls out of a brand new cylinder.