That cylinder looks OK. I have three engines and they are all different. One has the piston in different than the others, but it doesn't make it backwards. the wrist pin is in the center, and the pins keep the rings out of the ports. I take all my engines apart at least twice as they break in. I hone the high spots off the piston, I guess you could wait and break them in but with a chrome cylinder it will take a long time. One thing I do to all my engines is port them. The exhaust is the worst, It is one way to keep the HP down, but it makes the engine run hot. You can safely raise it 3/16. I have more, but I do all the ports. I match the cases and get the transfer port webbing out of the way. My bike will out pull the Whizzes but it will tear up the spokes too. I have never winged it up all the way, I think it will fly apart, it was never made to run that much HP. The port needs to be smoothed over on the inside to keep the chrome from tearing. I leave the port rounded at the top also to help the rings transfer. The engine that would not run well was fixed as soon as I did the port. Also I am not using the stock carb, you can't tune it correctly. To smooth over the new port on the inside, just take a round rod 1/4 in diameter and rub it at a 45 degree angle to the port all around that should get the edge smooth. Have fun, Dave
PS: Let me know what you try, I will keep looking, this is a great Forum.