So it has actually stripped the threads, not just cracked the cast aluminium?
I was hoping you could get away with putting a grade 8.8 or higher stud into the hole with red loctite and that would be a decent seal for the crack too. The intake does not need to be bolted down particularly tightly, just snugged down as it's a vacuum in there not pressure trying to force its way out like the exhaust and head. The studs rather th an bolts allow you to snug down the first nut and then hold it while you torque down a second nut, which doesn't put the stress on the cylinder threads but is still resistant to shaking loose. Also as you mentioned you don't want to be unthreading and retreading into the (very bad) cast aluminium.
Idk about the Zeda engines. I think it'll have the 40mm centre to centre stud spacing on the intake but you'll have to measure that, and the length of the cylinder, but maybe someone can tell you from experience about replacement cylinders for the Zeda 80.
The tuned pipe will surely help but only when it's "on the pipe" not when idling etc. as far as I know from reading this forum. I don't have a tuned pipe.
The reed valve intake is a lot different, you'll need a windowed piston, preferably some changes to the porting, and you'll have different engine performance characteristics that you may or may not prefer. But yes it should stop any reversion of the flow of the intake, reduce intake velocity (so larger jet needed) and thereby reduce noise too.
I haven't ported the spare cylinder to try out my RSE style (small) reed valve yet. I have used red loctite on my intake studs so I can't fit it on my current cylinder lol. It comes with bolts though maybe they can be switched for long studs, I'm not sure.